Complete Genomics, Inc.

SELF-ASSEMBLED SINGLE MOLECULE ARRAYS AND USES THEREOF

#2 | 2018-01-04

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EFFICIENT ARRAYS OF AMPLIFIED POLYNUCLEOTIDES

#3 | 2017-10-12 ✅ Patent 11,214,832 granted on 2022-01-04

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Methods and compositions for efficient base calling in sequencing reactions

#4 | 2017-10-05 ✅ Patent 9,917,990 granted on 2018-03-13

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Imaging systems with movable scan mirrors

#5 | 2017-08-24

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AFFINITY TAG LABELED NUCLEOSIDES AND USES

#6 | 2017-08-10

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High Throughput Genome Sequencing on DNA Arrays

#7 | 2017-06-22 ✅ Patent 10,351,909 granted on 2019-07-16

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DNA sequencing from high density DNA arrays using asynchronous reactions

#8 | 2017-06-01 ✅ Patent 9,944,984 granted on 2018-04-17

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High density DNA array

#9 | 2017-05-04 ✅ Patent 11,389,779 granted on 2022-07-19

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Methods of preparing a library of nucleic acid fragments tagged with oligonucleotide bar code sequences

#10 | 2017-01-12

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TECHNIQUES FOR SCANNED ILLUMINATION

#11 | 2016-01-21 ✅ Patent 9,650,673 granted on 2017-05-16

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Single molecule arrays for genetic and chemical analysis

#12 | 2015-12-31 ✅ Patent 9,524,369 granted on 2016-12-20

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Processing and analysis of complex nucleic acid sequence data

#13 | 2015-06-11 ✅ Patent 9,285,578 granted on 2016-03-15

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Method for imaging high density biochemical arrays with sub-pixel alignment

#14 | 2015-03-19 ✅ Patent 9,359,641 granted on 2016-06-07

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Method and system for accurate alignment and registration of array for DNA sequencing

#15 | 2014-12-25 ✅ Patent 9,222,132 granted on 2015-12-29

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Methods and compositions for efficient base calling in sequencing reactions

#16 | 2014-12-04 ✅ Patent 9,523,125 granted on 2016-12-20

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Methods and compositions for efficient base calling in sequencing reactions

#17 | 2014-10-30 ✅ Patent 9,328,382 granted on 2016-05-03

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Multiple tagging of individual long DNA fragments

#18 | 2014-08-21 ✅ Patent 8,965,196 granted on 2015-02-24

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Method and system for imaging high density biochemical arrays with sub-pixel alignment

#19 | 2014-08-14

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METHODS FOR ESTIMATING GENOME-WIDE COPY NUMBER VARIATIONS

#20 | 2014-07-31 ✅ Patent 9,267,172 granted on 2016-02-23

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Efficient base determination in sequencing reactions

#21 | 2014-07-03

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OLIGOMER SEQUENCES MAPPING

#22 | 2014-06-05 ✅ Patent 9,628,676 granted on 2017-04-18

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Imaging systems with movable scan mirrors

#23 | 2014-06-05 ✅ Patent 9,488,823 granted on 2016-11-08

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Techniques for scanned illumination

#24 | 2014-04-24 ✅ Patent 10,347,361 granted on 2019-07-09

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Genome explorer system to process and present nucleotide variations in genome sequence data

#25 | 2014-03-27 ✅ Patent 9,880,089 granted on 2018-01-30

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High-density devices with synchronous tracks for quad-cell based alignment correction

#26 | 2014-02-20

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Sequencing Small Amounts of Complex Nucleic Acids

#27 | 2014-01-16 ✅ Patent 9,637,784 granted on 2017-05-02

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Methods for DNA sequencing and analysis using multiple tiers of aliquots

#28 | 2014-01-09 ✅ Patent 9,637,785 granted on 2017-05-02

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Tagged fragment library configured for genome or cDNA sequence analysis

#29 | 2014-01-02 ✅ Patent 9,499,863 granted on 2016-11-22

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Reducing GC bias in DNA sequencing using nucleotide analogs

#30 | 2013-12-05 ✅ Patent 8,765,359 granted on 2014-07-01

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Method of fabricating patterned functional substrates

#31 | 2013-10-24 ✅ Patent 9,803,239 granted on 2017-10-31

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Flow cells for high density array chips

#32 | 2013-08-29 ✅ Patent 8,660,421 granted on 2014-02-25

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Method and system for imaging high density biochemical arrays with sub-pixel alignment

#33 | 2013-07-11 ✅ Patent 10,837,879 granted on 2020-11-17

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Treatment for stabilizing nucleic acid arrays

#34 | 2013-05-16 ✅ Patent 9,524,369 granted on 2016-12-20

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Processing and Analysis of Complex Nucleic Acid Sequence Data

#35 | 2013-05-02

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DETERMINING VARIANTS IN GENOME OF A HETEROGENEOUS SAMPLE

#36 | 2013-04-18 ✅ Patent 9,514,272 granted on 2016-12-06

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Identification of DNA fragments and structural variations

#37 | 2013-03-07

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Sequencing Small Amounts of Complex Nucleic Acids

#38 | 2013-03-07 ✅ Patent 9,238,834 granted on 2016-01-19

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Efficient shotgun sequencing methods

#39 | 2013-02-28 ✅ Patent 8,880,456 granted on 2014-11-04

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Analyzing genome sequencing information to determine likelihood of co-segregating alleles on haplotypes

#40 | 2013-02-28 ✅ Patent 9,679,103 granted on 2017-06-13

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Phasing of heterozygous loci to determine genomic haplotypes

#41 | 2012-09-06 ✅ Patent 9,671,344 granted on 2017-06-06

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High-density biochemical array chips with asynchronous tracks for alignment correction by moiré averaging

#42 | 2012-08-09 ✅ Patent 8,428,454 granted on 2013-04-23

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Method and system for imaging high density biochemical arrays with sub-pixel alignment

#43 | 2012-08-02

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IDENTIFYING REARRANGEMENTS IN A SEQUENCED GENOME

#44 | 2012-05-31

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High throughput genome sequencing on DNA arrays

#45 | 2012-05-17 ✅ Patent 9,551,026 granted on 2017-01-24

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Method for nucleic acid detection using voltage enhancement

#46 | 2012-05-17

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Methods and Oligonucleotide Designs for Insertion of Multiple Adaptors Employing Selective Methylation

#47 | 2012-04-26 ✅ Patent 8,415,099 granted on 2013-04-09

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Efficient base determination in sequencing reactions

#48 | 2012-04-26 ✅ Patent 8,175,452 granted on 2012-05-08

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Method and system for imaging high density biochemical arrays with sub-pixel alignment

#49 | 2012-04-19 ✅ Patent 8,725,422 granted on 2014-05-13

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Methods for estimating genome-wide copy number variations

#50 | 2012-01-05

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FLOW CELLS FOR BIOCHEMICAL ANALYSIS

#51 | 2012-01-05

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FLOW CELLS FOR BIOCHEMICAL ANALYSIS

#52 | 2012-01-05 ✅ Patent 9,228,228 granted on 2016-01-05

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Efficient arrays of amplified polynucleotides

#53 | 2011-11-17 ✅ Patent 9,023,769 granted on 2015-05-05

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cDNA library for nucleic acid sequencing

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Structures for enhanced detection of fluorescence

#55 | 2011-11-03 ✅ Patent 8,774,494 granted on 2014-07-08

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Method and system for accurate alignment and registration of array for DNA sequencing

#56 | 2011-02-10 ✅ Patent 8,592,150 granted on 2013-11-26

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Methods and compositions for long fragment read sequencing

#57 | 2011-01-20 ✅ Patent 8,731,843 granted on 2014-05-20

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Oligomer sequences mapping

#58 | 2011-01-06

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METHOD AND SYSTEM FOR CALLING VARIATIONS IN A SAMPLE POLYNUCLEOTIDE SEQUENCE WITH RESPECT TO A REFERENCE POLYNUCLEOTIDE SEQUENCE

#59 | 2010-11-11 ✅ Patent 8,738,296 granted on 2014-05-27

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Indexing a reference sequence for oligomer sequence mapping

#60 | 2010-11-11 ✅ Patent 8,615,365 granted on 2013-12-24

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Oligomer sequences mapping

#61 | 2010-08-05 ✅ Patent 8,407,554 granted on 2013-03-26

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Method and apparatus for quantification of DNA sequencing quality and construction of a characterizable model system using Reed-Solomon codes

#62 | 2010-04-29 ✅ Patent 8,518,640 granted on 2013-08-27

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Nucleic acid sequencing and process

#63 | 2009-12-24 ✅ Patent 8,298,768 granted on 2012-10-30

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Efficient shotgun sequencing methods

#64 | 2009-10-29

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ARRAY STRUCTURES FOR NUCLEIC ACID DETECTION

#65 | 2009-10-22

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Methods and compositions for preventing bias in amplification and sequencing reactions

#66 | 2009-10-22 ✅ Patent 8,617,811 granted on 2013-12-31

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Methods and compositions for efficient base calling in sequencing reactions

#67 | 2009-08-13 ✅ Patent 7,901,890 granted on 2011-03-08

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Methods and oligonucleotide designs for insertion of multiple adaptors employing selective methylation

#68 | 2009-07-09 ✅ Patent 7,897,344 granted on 2011-03-01

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Methods and oligonucleotide designs for insertion of multiple adaptors into library constructs

#69 | 2009-07-09 ✅ Patent 8,551,702 granted on 2013-10-08

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Efficient base determination in sequencing reactions

#70 | 2009-06-18 ✅ Patent 9,382,585 granted on 2016-07-05

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Apparatus for high throughput sequencing of nucleic acids

#71 | 2009-06-04 ✅ Patent 7,910,302 granted on 2011-03-22

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Efficient arrays of amplified polynucleotides

#72 | 2009-05-28 ✅ Patent 8,445,197 granted on 2013-05-21

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Single molecule arrays for genetic and chemical analysis

#73 | 2009-05-28 ✅ Patent 8,445,196 granted on 2013-05-21

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Single molecule arrays for genetic and chemical analysis

#74 | 2009-05-07

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High throughput genome sequencing on DNA arrays

#75 | 2009-05-07 ✅ Patent 7,988,918 granted on 2011-08-02

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Structures for enhanced detection of fluorescence

#76 | 2009-04-30

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SELECTION OF DNA ADAPTOR ORIENTATION BY AMPLIFICATION

#77 | 2009-04-30

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SELECTION OF DNA ADAPTOR ORIENTATION BY HYBRID CAPTURE

#78 | 2009-04-30 ✅ Patent 8,951,731 granted on 2015-02-10

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Sequence analysis using decorated nucleic acids

#79 | 2009-04-23

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METHODS OF NUCLEIC ACID IDENTIFICATION IN LARGE-SCALE SEQUENCING

#80 | 2009-03-19

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SELECTION OF DNA ADAPTOR ORIENTATION BY NICKING

#81 | 2009-02-05 ✅ Patent 7,906,285 granted on 2011-03-15

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Random array DNA analysis by hybridization

#82 | 2009-01-08 ✅ Patent 9,476,054 granted on 2016-10-25

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Two-adaptor library for high-throughput sequencing on DNA arrays

#83 | 2009-01-08 ✅ Patent 8,278,039 granted on 2012-10-02

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Random array DNA analysis by hybridization

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Random array DNA analysis by hybridization

#85 | 2009-01-01 ✅ Patent 8,722,326 granted on 2014-05-13

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High throughput genome sequencing on DNA arrays

#86 | 2008-12-25 ✅ Patent 7,910,354 granted on 2011-03-22

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Efficient arrays of amplified polynucleotides

#87 | 2008-09-25 ✅ Patent 8,133,719 granted on 2012-03-13

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Methods for making single molecule arrays

#88 | 2008-09-11

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METHODS FOR COMPUTING POSITIONAL BASE PROBABILITIES USING EXPERMINENTALS BASE VALUE DISTRIBUTIONS

#89 | 2008-09-04 ✅ Patent 9,334,490 granted on 2016-05-10

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Methods and compositions for large-scale analysis of nucleic acids using DNA deletions

#90 | 2008-07-17

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